- Increasing the predictive accuracy of an ML model that predicts whether using a infrared spectral signature to identify if an individual has a mosquito-related disease like malaria. eg. would be used in a scanning device to replace PCR.
- Prediction of bacterial species resistance to the antibiotic rifampicin. This would use ML to build a model with genome data and predict antibiotic resistance in certain bacterial species and whether some species are unable to evolve resistance. This data would be used in future, experimental projects.
- Improving scalability of single-cell immune repertoire analysis. Omniscope is one startup working on improving current workflows.
- Developing better statistical methods to assess diversity of immune receptors using sequencing depths or cell numbers
- Single-cell trajectory analysis with immune repertoires
I've seen so many problems get hung up on two things:
1) It was a SNR problem at the point of data measurement, and no amount of ML can fix that.
2) It's a computational irreducibility problem that was mistaken for a convolution
Of what you listed, the penultimate honestly sounds the most realistic and least pie-in-the-sky. Personally, I'd avoid anything predictive because of the two issues I mentioned. It can be done for some things, but it's really quite difficult to tell for what.